Direction between animals ---------------------------------------------------- .. automodule:: simba.plotting.directing_animals_visualizer.DirectingOtherAnimalsVisualizer :members: :show-inheritance: Direction between animals - multiprocess -------------------------------------------------------- .. automodule:: simba.plotting.directing_animals_visualizer_mp.DirectingOtherAnimalsVisualizerMultiprocess :members: :show-inheritance: ROI feature visualization ---------------------------------------------- .. automodule:: simba.plotting.ROI_feature_visualizer.ROIfeatureVisualizer :members: :show-inheritance: ROI feature visualization - multiprocess -------------------------------------------------- .. automodule:: simba.plotting.ROI_feature_visualizer_mp.ROIfeatureVisualizerMultiprocess :members: :show-inheritance: ROI directing visualization -------------------------------------------------- .. autoclass:: simba.plotting.roi_directing_visualizer.DirectingROIVisualizer :members: :show-inheritance: ROI visualizer ---------------------------------- .. automodule:: simba.plotting.roi_plotter.ROIPlotter :members: :show-inheritance: ROI visualizer - multiprocess -------------------------------------- .. automodule:: simba.plotting.roi_plotter_mp.ROIPlotMultiprocess :members: :show-inheritance: Circular base feature plotter ------------------------------------ .. automodule:: simba.plotting.circular_feature_overlay_plotter.CircularFeaturePlotter :members: :show-inheritance: Circular diffusion plotting ------------------------------------ .. automodule:: simba.plotting.circular_plotting.CircularPlotting :members: :show-inheritance: Classifier validation ------------------------------------ .. automodule:: simba.plotting.clf_validator.ClassifierValidationClips :members: :show-inheritance: Classifier validation - multiprocess ---------------------------------------- .. automodule:: simba.plotting.clf_validator_mp.ClassifierValidationClipsMultiprocess :members: :show-inheritance: Data plotter ----------------------------------- .. automodule:: simba.plotting.data_plotter.DataPlotter :members: :show-inheritance: Distance plotter --------------------------------------- .. automodule:: simba.plotting.distance_plotter.DistancePlotterSingleCore :members: :show-inheritance: Distance plotter - multiprocess ------------------------------------------- .. automodule:: simba.plotting.distance_plotter_mp.DistancePlotterMultiCore :members: :show-inheritance: Quick path plot (Ez path plot) ---------------------------------- .. automodule:: simba.plotting.ez_path_plot.EzPathPlot :members: :show-inheritance: Merge videos --------------------------------------------- .. automodule:: simba.plotting.frame_mergerer_ffmpeg.FrameMergererFFmpeg :members: :show-inheritance: Gantt plot ------------------------------------ .. automodule:: simba.plotting.gantt_creator.GanttCreatorSingleProcess :members: :show-inheritance: Gantt plot - multiprocess ---------------------------------------- .. automodule:: simba.plotting.gantt_creator_mp.GanttCreatorMultiprocess :members: :show-inheritance: Gantt plot - fancy ---------------------------------------- .. automodule:: simba.plotting.gantt_plotly.gantt_plotly :members: :show-inheritance: Classifier heatmaps --------------------------------------- .. automodule:: simba.plotting.heat_mapper_clf.HeatMapperClfSingleCore :members: :show-inheritance: Classifier heatmaps - multiprocess ------------------------------------------- .. automodule:: simba.plotting.heat_mapper_clf_mp.HeatMapperClfMultiprocess :members: :show-inheritance: Location heatmaps -------------------------------------------- .. automodule:: simba.plotting.heat_mapper_location.HeatmapperLocationSingleCore :members: :show-inheritance: Location heatmaps - multiprocess ------------------------------------------------ .. automodule:: simba.plotting.heat_mapper_location_mp.HeatMapperLocationMultiprocess :members: :show-inheritance: Interactive classifier probability plotter ------------------------------------------------------- .. automodule:: simba.plotting.interactive_probability_grapher.InteractiveProbabilityGrapher :members: :show-inheritance: Path plotter ----------------------------------- .. automodule:: simba.plotting.path_plotter.PathPlotterSingleCore :members: :show-inheritance: Path plotter - multiprocess --------------------------------------- .. automodule:: simba.plotting.path_plotter_mp.PathPlotterMulticore :members: :show-inheritance: Classification plotter ---------------------------------------- .. automodule:: simba.plotting.plot_clf_results.PlotSklearnResultsSingleCore :members: :show-inheritance: Classification plotter - multiprocess -------------------------------------------- .. automodule:: simba.plotting.plot_clf_results_mp.PlotSklearnResultsMultiProcess :members: :show-inheritance: Annotation bout plotter -------------------------------------------- .. automodule:: simba.plotting.annotation_videos.PlotAnnotatedBouts :members: :show-inheritance: Pose-estimation plotter ----------------------------------------- .. automodule:: simba.plotting.pose_plotter_mp.PosePlotterMultiProcess :members: :show-inheritance: Skeleton video creator ----------------------------------------- .. autoclass:: simba.plotting.skeleton_video_creator.SkeletonVideoCreator :members: :show-inheritance: Classification probability plotter ------------------------------------------------ .. automodule:: simba.plotting.probability_plot_creator.TresholdPlotCreatorSingleProcess :members: :show-inheritance: Classification probability plotter - multiprocess ---------------------------------------------------- .. automodule:: simba.plotting.probability_plot_creator_mp.TresholdPlotCreatorMultiprocess :members: :show-inheritance: SHAP aggregation plotter -------------------------------------------------- .. automodule:: simba.plotting.shap_agg_stats_visualizer.ShapAggregateStatisticsVisualizer :members: :show-inheritance: Single video validation plotter ----------------------------------------------------------- .. automodule:: simba.plotting.single_run_model_validation_video.ValidateModelOneVideo :members: :show-inheritance: Single video validation plotter - multiprocess --------------------------------------------------------------- .. automodule:: simba.plotting.single_run_model_validation_video_mp.ValidateModelOneVideoMultiprocess :members: :show-inheritance: Geometry plotter (generic) --------------------------------------------------------------- .. autoclass:: simba.plotting.geometry_plotter.GeometryPlotter :members: :show-inheritance: Spontaneous alternation plotter --------------------------------------------------------------- .. automodule:: simba.plotting.spontaneous_alternation_plotter.SpontaneousAlternationsPlotter :members: :show-inheritance: "Blob" plotter --------------------------------------------------------------- .. automodule:: simba.plotting.blob_plotter.BlobPlotter :members: :show-inheritance: "Blob" plotter --------------------------------------------------------------- .. automodule:: simba.plotting.blob_visualizer.BlobVisualizer :members: :show-inheritance: YOLO bounding-box plotter --------------------------------------------------------------- .. autoclass:: simba.plotting.yolo_visualize.YOLOVisualizer :members: :show-inheritance: YOLO model comparator --------------------------------------------------------------- .. autoclass:: simba.plotting.compare_bbox_mdls.YoloModelComparator :members: :show-inheritance: Plotting methods ----------------------------------- .. automodule:: simba.mixins.plotting_mixin :members: :show-inheritance: Light-/Dark-box plotting ----------------------------------- .. automodule:: simba.plotting.light_dark_box_plotter.LightDarkBoxPlotter :members: :show-inheritance: