API Reference
- Data processors
- Aggregate classifier statistics calculator
- Directing-other-animals calculator
- Forward-spike-time-tiling coefficient calculator
- Pose interpolator calculator
- Pose interpolator and smoothing calculators
- Kleinberg calculator
- Movement calculator
- Pup-retrieval calculator
- SimBA pyburst calculator
- Severity calculator
- Classifier time-bins calculator
- Movement time-bins calculator
- Mutual exclusivity refactorer
- Boolean conditional calculator
- Gibbs sampling
- Spontaneous alternation calculator
- Pose estimation importers
- Mixins
- Config reader methods
- Feature extraction methods
- Geometry transformation methods
- Network (Graph) methods
- Feature extraction supplement methods
- Statistics methods
- Circular feature extraction methods
- Plotting methods
- GUI pop-up methods
- Pose importing methods
- Modelling methods
- Time-series feature methods
- Unsupervised methods
- Annotation GUI methods
- Image attribute extraction
- SimBA bounding-box tools (animal-anchoired ROIs)
- Cue light tools
- Feature extractors
- Default feature extractor for 1 animals and 14 body-parts
- Default feature extractor for 1 animals and 16 body-parts
- Default feature extractor for 1 animals and 4 body-parts
- Default feature extractor for 1 animals and 7 body-parts
- Default feature extractor for 1 animals and 8 body-parts
- Default feature extractor for 2 animals and 16 body-parts
- Default feature extractor for 1 animals and 9 body-parts
- Default feature extractor for user-defined body-parts
- Feature extractor for feature subset family
- Jitted methods for convex-hull related calculations
- Labelling
- Outlier correction tools
- Plotting / visualization
- Direction between animals
- Direction between animals - multiprocess
- ROI feature visualization
- ROI feature visualization - multiprocess
- ROI visualizer
- ROI visualizer - multiprocess
- Circular base feature plotter
- Circular diffusion plotting
- Classifier validation
- Data plotter
- Distance plotter
- Distance plotter - multiprocess
- Quick path plot (Ez path plot)
- Merge videos
- Gantt plot
- Gantt plot - multiprocess
- Classifier heatmaps
- Classifier heatmaps - multiprocess
- Location heatmaps
- Location heatmaps - multiprocess
- Interactive classifier probability plotter
- Path plotter
- Path plotter - multiprocess
- Classification plotter
- Classification plotter - multiprocess
- Pose-estimation plotter
- Classification probability plotter
- Classification probability plotter - multiprocess
- SHAP aggregation plotter
- Single video validation plotter
- Single video validation plotter - multiprocess
- Geometry plotter (generic)
- Spontaneous alternation plotter
- Pose-estimation data processors
- Region-of-interest tools
- Third-party behavior labels (annotation) appenders
- SimBA UI
- Unsupervised analyses in SimBA
- SimBA utilities
- simba.utils.cli package
- Video processors